Web Reference: Two common types of alignment algorithms are global alignment and local alignment. While both methods aim to identify similarities between sequences, they have distinct attributes that make them suitable for different purposes. Global alignment is when you take the entirety of both sequences into consideration when finding alignments, whereas in local you may only take a small portion into account. A global alignment is defined as the end-to-end alignment of two strings s and t. A local alignment of string s and t is an alignment of substrings of s with substrings of t.
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