Web Reference: After introducing IGV and outlining the tutorial I explain how to download/install IGV, how to get it working properly, and a little troubleshooting. It supports flexible integration of all the common types of genomic data and metadata, investigator-generated or publicly available, loaded from local or cloud sources. This site is focused on the IGV desktop application. See https://igv.org for links to all forms of IGV. Copy the files to your local drive, and in IGV choose File > Load from File..., select the bam file, and click OK. Note that the bam and index files must be in the same directory for IGV to load these properly.
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